with_AGI_gene
<html><body><title>OMAT3P016630</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300166300000i/OMAT3P016630.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300166300000i/OMAT3P016630.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300166300000i/OMAT3P016630.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501141500000i">OMAT5P114150</a></td><td>0.909775</td><td>-</td><td>AT5G54380</td><td>THE1 (THESEUS1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200123800000i">OMAT2P012380</a></td><td>0.895365</td><td>-</td><td>AT2G44500</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300029500000i">OMAT3P002950</a></td><td>0.89308</td><td>-</td><td>AT3G08600</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u501087000000i">OMAT5P108700</a></td><td>0.88421</td><td>-</td><td>AT5G35750</td><td>AHK2 (ARABIDOPSIS HISTIDINE KINASE 2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300150400000i">OMAT3P015040</a></td><td>0.879491</td><td>-</td><td>AT3G54810</td><td>zinc finger (GATA type) family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401008050000i">OMAT4P100805</a></td><td>0.873343</td><td>-</td><td>AT4G02130</td><td>GATL6</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201094800000i">OMAT2P109480</a></td><td>0.87172</td><td>-</td><td>AT2G39180</td><td>CCR2 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101031800000i">OMAT1P103180</a></td><td>0.865656</td><td>-</td><td>AT1G10020</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401025600000i">OMAT4P102560</a></td><td>0.86242</td><td>-</td><td>AT4G12420</td><td>SKU5</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100229000000i">OMAT1P022900</a></td><td>0.86197</td><td>-</td><td>AT1G77640</td><td>AP2 domain-containing transcription factor, putative</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300010900000i">OMAT3P001090</a></td><td>-0.771034</td><td>-</td><td>AT3G03340</td><td>UNE6 (unfertilized embryo sac 6)</td><td>AT3G03341</td><td>unknown protein</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400081900000i">OMAT4P008190</a></td><td>-0.748693</td><td>-</td><td>AT4G26000</td><td>PEP (PEPPER)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100220500000i">OMAT1P022050</a></td><td>-0.731502</td><td>-</td><td>AT1G75400</td><td>protein binding / zinc ion binding</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500209600000i">OMAT5P020960</a></td><td>-0.729373</td><td>-</td><td>AT5G67330</td><td>ATNRAMP4</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300087000000i">OMAT3P008700</a></td><td>-0.724468</td><td>-</td><td>AT3G22990</td><td>LFR (LEAF AND FLOWER RELATED)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201079200000i">OMAT2P107920</a></td><td>-0.724282</td><td>-</td><td>AT2G35345</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u300153400000i">OMAT3P015340</a></td><td>-0.71667</td><td>-</td><td>AT3G55520</td><td>immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301010100000i">OMAT3P101010</a></td><td>-0.711337</td><td>-</td><td>AT3G03341</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400042900000i">OMAT4P004290</a></td><td>-0.708942</td><td>-</td><td>AT4G15410</td><td>PUX5 (Arabidopsis thaliana serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400097100000i">OMAT4P009710</a></td><td>-0.708746</td><td>-</td><td>AT4G29490</td><td>aminopeptidase/ manganese ion binding</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u300166300000i/OMAT3P016630-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 2.57e-36</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>2.57e-36 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0065008</td><td>regulation of biological quality</td><td>18/200</td><td>4.82</td><td>8.40e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0016049</td><td>cell growth</td><td>11/200</td><td>6.88</td><td>8.64e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0032535</td><td>regulation of cellular component size</td><td>11/200</td><td>6.63</td><td>1.29e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0090066</td><td>regulation of anatomical structure size</td><td>11/200</td><td>6.63</td><td>1.29e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006796</td><td>phosphate metabolic process</td><td>22/200</td><td>3.31</td><td>2.52e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0006793</td><td>phosphorus metabolic process</td><td>22/200</td><td>3.31</td><td>2.56e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009719</td><td>response to endogenous stimulus</td><td>17/200</td><td>3.30</td><td>4.89e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006464</td><td>protein modification process</td><td>26/200</td><td>2.50</td><td>5.76e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0023033</td><td>signaling pathway</td><td>13/200</td><td>3.85</td><td>8.83e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0010033</td><td>response to organic substance</td><td>19/200</td><td>2.84</td><td>1.41e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009725</td><td>response to hormone stimulus</td><td>15/200</td><td>3.17</td><td>2.45e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0043412</td><td>macromolecule modification</td><td>26/200</td><td>2.29</td><td>2.64e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0048869</td><td>cellular developmental process</td><td>10/200</td><td>3.60</td><td>1.22e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009653</td><td>anatomical structure morphogenesis</td><td>11/200</td><td>3.27</td><td>1.59e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0042221</td><td>response to chemical stimulus</td><td>24/200</td><td>2.10</td><td>1.95e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009628</td><td>response to abiotic stimulus</td><td>17/200</td><td>2.29</td><td>4.97e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>13/200</td><td>2.50</td><td>8.12e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0050794</td><td>regulation of cellular process</td><td>25/200</td><td>1.64</td><td>5.39e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005886</td><td>plasma membrane</td><td>43/200</td><td>3.47</td><td>1.31e-13</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=plasma%20membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>59/200</td><td>2.15</td><td>1.66e-09</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>132/200</td><td>1.44</td><td>2.43e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005618</td><td>cell wall</td><td>17/200</td><td>5.12</td><td>7.97e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0030312</td><td>external encapsulating structure</td><td>17/200</td><td>5.08</td><td>8.90e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0009505</td><td>plant-type cell wall</td><td>11/200</td><td>6.98</td><td>7.33e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005773</td><td>vacuole</td><td>16/200</td><td>4.63</td><td>8.43e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>55/200</td><td>1.47</td><td>8.61e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>50/200</td><td>1.44</td><td>2.36e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0031224</td><td>intrinsic to membrane</td><td>11/200</td><td>2.05</td><td>8.07e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0016740</td><td>transferase activity</td><td>43/200</td><td>2.63</td><td>1.16e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>M</td><td>5</td><td>GO:0016301</td><td>kinase activity</td><td>27/200</td><td>3.36</td><td>1.00e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>M</td><td>4</td><td>GO:0016772</td><td>transferase activity, transferring phosphorus-containing groups</td><td>28/200</td><td>3.05</td><td>4.27e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>M</td><td>5</td><td>GO:0016773</td><td>phosphotransferase activity, alcohol group as acceptor</td><td>22/200</td><td>3.54</td><td>7.66e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>M</td><td>5</td><td>GO:0016758</td><td>transferase activity, transferring hexosyl groups</td><td>10/200</td><td>5.64</td><td>1.96e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016757</td><td>transferase activity, transferring glycosyl groups</td><td>11/200</td><td>3.77</td><td>4.17e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0017076</td><td>purine nucleotide binding</td><td>20/200</td><td>1.93</td><td>1.76e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0032555</td><td>purine ribonucleotide binding</td><td>19/200</td><td>1.94</td><td>2.09e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0032553</td><td>ribonucleotide binding</td><td>19/200</td><td>1.94</td><td>2.09e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0000166</td><td>nucleotide binding</td><td>23/200</td><td>1.74</td><td>3.40e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0030554</td><td>adenyl nucleotide binding</td><td>17/200</td><td>1.88</td><td>4.43e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0001883</td><td>purine nucleoside binding</td><td>17/200</td><td>1.88</td><td>4.43e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0001882</td><td>nucleoside binding</td><td>17/200</td><td>1.87</td><td>4.55e-03</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>175/200</td><td>2.30</td><td>5.49e-49</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>178/200</td><td>2.16</td><td>1.50e-46</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>168/200</td><td>2.29</td><td>2.71e-44</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>169/200</td><td>2.19</td><td>6.75e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>180/200</td><td>1.96</td><td>8.47e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>178/200</td><td>1.98</td><td>2.87e-40</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>172/200</td><td>2.05</td><td>2.85e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>172/200</td><td>2.05</td><td>3.44e-39</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>175/200</td><td>1.98</td><td>1.17e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>173/200</td><td>2.01</td><td>1.75e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>168/200</td><td>2.09</td><td>2.21e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>165/200</td><td>2.12</td><td>7.69e-38</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>178/200</td><td>1.89</td><td>5.53e-37</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>178/200</td><td>1.89</td><td>5.53e-37</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>172/200</td><td>1.96</td><td>2.57e-36</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>183/200</td><td>1.78</td><td>5.36e-36</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>173/200</td><td>1.92</td><td>1.81e-35</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>168/200</td><td>1.99</td><td>3.11e-35</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>174/200</td><td>1.88</td><td>1.25e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>164/200</td><td>2.02</td><td>3.97e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>176/200</td><td>1.82</td><td>2.07e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>177/200</td><td>1.80</td><td>4.01e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>177/200</td><td>1.80</td><td>4.01e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>176/200</td><td>1.80</td><td>1.45e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>180/200</td><td>1.73</td><td>5.22e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>183/200</td><td>1.69</td><td>7.47e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>180/200</td><td>1.72</td><td>1.37e-31</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>159/200</td><td>1.92</td><td>5.81e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>19/200</td><td>1.71</td><td>8.22e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0006345</td><td>pollen tube</td><td>41/200</td><td>1.41</td><td>8.53e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>20/200</td><td>1.68</td><td>8.57e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>19/200</td><td>1.70</td><td>8.84e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>176/200</td><td>2.08</td><td>1.67e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>175/200</td><td>2.08</td><td>5.54e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>175/200</td><td>2.08</td><td>5.73e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>168/200</td><td>2.18</td><td>3.09e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>168/200</td><td>2.18</td><td>3.36e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>166/200</td><td>2.02</td><td>2.92e-35</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>173/200</td><td>1.91</td><td>3.95e-35</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>172/200</td><td>1.91</td><td>1.62e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>165/200</td><td>2.00</td><td>3.66e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>165/200</td><td>1.99</td><td>1.09e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>177/200</td><td>1.79</td><td>7.36e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>175/200</td><td>1.80</td><td>2.90e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>160/200</td><td>2.01</td><td>3.53e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>178/200</td><td>1.75</td><td>1.31e-31</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>179/200</td><td>1.71</td><td>1.30e-30</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>plasma</td><td>-</td><td>41/200</td><td>3.58</td><td>1.89e-13</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=plasma">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr001245</td><td>-</td><td>15/200</td><td>5.88</td><td>7.35e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>56/200</td><td>2.10</td><td>1.15e-08</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr000719</td><td>-</td><td>23/200</td><td>3.69</td><td>1.89e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>tyrosine</td><td>-</td><td>17/200</td><td>4.79</td><td>2.20e-08</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=tyrosine">2.00E-17</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr011009</td><td>-</td><td>23/200</td><td>3.56</td><td>3.78e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>phosphorylation</td><td>-</td><td>22/200</td><td>3.58</td><td>6.44e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr017441</td><td>-</td><td>18/200</td><td>4.19</td><td>7.59e-08</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>vacuole</td><td>-</td><td>15/200</td><td>4.76</td><td>1.36e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>threonine</td><td>-</td><td>24/200</td><td>3.20</td><td>1.50e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=threonine">2.00E-71</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>kinase</td><td>-</td><td>29/200</td><td>2.75</td><td>2.45e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=kinase">0</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr008271</td><td>-</td><td>17/200</td><td>3.48</td><td>2.32e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>active</td><td>-</td><td>23/200</td><td>2.81</td><td>2.59e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>terminal</td><td>-</td><td>40/200</td><td>2.08</td><td>2.70e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>serine</td><td>-</td><td>24/200</td><td>2.69</td><td>3.44e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=serine">2.00E-71</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>amino</td><td>-</td><td>23/200</td><td>2.67</td><td>6.12e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=amino">6.00E-30</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr002290</td><td>-</td><td>12/200</td><td>4.07</td><td>9.58e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr017442</td><td>-</td><td>15/200</td><td>2.85</td><td>8.79e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>signaling</td><td>-</td><td>12/200</td><td>3.22</td><td>1.05e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>glycosyl</td><td>-</td><td>12/200</td><td>2.81</td><td>3.91e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>function</td><td>-</td><td>28/200</td><td>1.80</td><td>8.94e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=function">7.00E-59</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>carbohydrate</td><td>-</td><td>10/200</td><td>2.55</td><td>2.10e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>subgroup</td><td>-</td><td>10/200</td><td>2.46</td><td>2.74e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=subgroup">1.00E-56</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>encodes</td><td>-</td><td>38/200</td><td>1.49</td><td>4.43e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>response</td><td>-</td><td>28/200</td><td>1.56</td><td>6.81e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>receptor</td><td>-</td><td>10/200</td><td>2.10</td><td>8.73e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT3G59110&keyword=receptor">7.00E-74</a></td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
OMAT3P016630
0.7335770000000000346